Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00088 | Not Available | Positive | 5817472 - 5818347 | 31792.0 |
| trba protein | ALP24_00089 | Not Available | Positive | 5818355 - 5818639 | 10064.1 |
| pin domain protein | ALP24_100758 | Not Available | Negative | 5818629 - 5819072 | 16025.3 |
| hypothetical protein | ALP24_00090 | Not Available | Negative | 5819003 - 5819221 | 8131.06 |
| putative trbb protein | ALP24_00091 | Not Available | Positive | 5819295 - 5820380 | 39570.3 |
| type iii effector hopav1 | ALP24_100684 | Not Available | Positive | 5820367 - 5822655 | 84768.8 |
| hypothetical protein | ALP24_00092 | Not Available | Positive | 5822683 - 5823105 | 16023.7 |
| hypothetical protein | ALP24_00093 | Not Available | Positive | 5823127 - 5823690 | 21937.2 |
| gntr family transcriptional regulator | ALP24_00094 | Not Available | Positive | 5823869 - 5824306 | 16530.0 |
| 3-oxoacid--coenzyme a transferase, subunit b | ALP24_04783 | Not Available | Negative | 5824627 - 5825102 | 16753.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









