Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial type ii/iii secretion system protein | ALP24_100528 | Not Available | Positive | 5722695 - 5723993 | 44840.1 |
| type ii/iv secretion system atpase tadz/cpae, associated with flp pilus assembly | ALP24_100172 | Not Available | Positive | 5723950 - 5725020 | 38797.8 |
| ompp1/fadl/todx family aromatic hydrocarbon degradation protein | ALP24_03194 | Not Available | Negative | 5725068 - 5726351 | 45796.4 |
| hypothetical protein | ALP24_03195 | Not Available | Negative | 5726598 - 5726900 | 11401.8 |
| hypothetical protein | ALP24_03196 | Not Available | Negative | 5727298 - 5727615 | 11366.5 |
| rmuc-like dna recombination protein | ALP24_03197 | Not Available | Positive | 5728245 - 5729723 | 55354.6 |
| dtw protein | ALP24_03198 | Not Available | Positive | 5730655 - 5731254 | 21832.6 |
| eama-like family transporter | ALP24_03199 | Not Available | Positive | 5731357 - 5732316 | 34695.9 |
| pyoverdine chromophore synthetase pvdl | ALP24_05227 | Not Available | Negative | 5732944 - 5740167 | 265611.0 |
| methylmalonate-semialdehyde dehydrogenase | ALP24_00946 | Not Available | Negative | 5740703 - 5742196 | 53620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









