Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopat1 | ALP24_05109 | Not Available | Negative | 5693980 - 5694155 | 6582.81 |
| hypothetical protein | ALP24_05555 | Not Available | Negative | 5694156 - 5694441 | 11128.2 |
| helix-turn-helix protein rpir:sugar isomerase | ALP24_05556 | Not Available | Negative | 5694466 - 5695491 | 36617.5 |
| dna-dependent helicase ii | ALP24_04143 | Not Available | Positive | 5695642 - 5697825 | 81706.8 |
| import inner membrane translocase, subunit tim44 | ALP24_04144 | Not Available | Positive | 5698054 - 5698899 | 30309.1 |
| smi1/knr4 protein | ALP24_04145 | Not Available | Positive | 5699031 - 5699438 | 15552.0 |
| sodium/hydrogen exchanger protein | ALP24_04146 | Not Available | Negative | 5699460 - 5701241 | 64273.8 |
| thioesterase superfamily | ALP24_04147 | Not Available | Positive | 5701536 - 5702021 | 18143.7 |
| pyridoxamine kinase | ALP24_04148 | Not Available | Negative | 5702073 - 5702939 | 31049.8 |
| hypothetical protein | ALP24_04149 | Not Available | Positive | 5703058 - 5703450 | 15040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









