Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | ALP24_05184 | Not Available | Negative | 5611033 - 5612568 | 58307.1 |
| liposaccharide abc-type transport system, atp-binding protein lptb | ALP24_03034 | Not Available | Negative | 5612710 - 5613030 | 11679.2 |
| inositol abc-type transport system, periplasmic substrate-binding protein | ALP24_02504 | Not Available | Positive | 5613117 - 5613832 | 25339.5 |
| abc transporter | ALP24_02505 | Not Available | Positive | 5613896 - 5615479 | 57517.2 |
| inositol abc-type transport system, permease protein | ALP24_02506 | Not Available | Positive | 5615527 - 5616552 | 35648.7 |
| hypothetical protein | ALP24_102623 | Not Available | Positive | 5616597 - 5616749 | 5407.54 |
| rna polymerase-binding protein dksa | ALP24_02507 | Not Available | Positive | 5616855 - 5617259 | 15460.3 |
| methyl-accepting chemotaxis protein | ALP24_02508 | Not Available | Positive | 5617446 - 5618207 | 25203.9 |
| chemotaxis sensor y transducer | ALP24_02509 | Not Available | Positive | 5618147 - 5618977 | 30919.3 |
| hypothetical protein | ALP24_02510 | Not Available | Positive | 5619249 - 5620733 | 54210.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









