Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase protein | ALP24_100203 | Not Available | Positive | 5578709 - 5580118 | 49938.1 |
| fad-binding oxidoreductase | ALP24_04453 | Not Available | Positive | 5579929 - 5581074 | 42032.4 |
| virb6 | ALP24_05216 | Not Available | Negative | 5581075 - 5581331 | 9542.98 |
| hypothetical protein | ALP24_03163 | Not Available | Negative | 5581342 - 5581695 | 13143.9 |
| virb5 | ALP24_03164 | Not Available | Negative | 5581728 - 5582174 | 15831.5 |
| pspf-like sigma 54-dependent transcriptional activator | ALP24_00804 | Not Available | Positive | 5582176 - 5582928 | 28973.1 |
| hypothetical protein | ALP24_04583 | Not Available | Negative | 5583039 - 5584487 | 52944.4 |
| helix-hairpin-helix dna-binding motif-containing protein | ALP24_00806 | Not Available | Negative | 5584484 - 5585065 | 21414.2 |
| drug/metabolite transporter superfamily permease | ALP24_00807 | Not Available | Positive | 5585165 - 5586100 | 32828.2 |
| putative monovalent cation/h+ antiporter subunit a | ALP24_00808 | Not Available | Positive | 5586295 - 5589219 | 105828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









