Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALP24_04579 | Not Available | Positive | 5520719 - 5522282 | 57195.0 |
| 3-carboxy-cis, cis-muconate cycloisomerase | ALP24_04607 | Not Available | Negative | 5522859 - 5523423 | 20177.4 |
| hypothetical protein | ALP24_102091 | Not Available | Negative | 5523296 - 5523583 | 10446.5 |
| 4-hydroxybenzoate transporter | ALP24_00907 | Not Available | Negative | 5523608 - 5524957 | 47313.0 |
| protocatechuate 3,4-dioxygenase, alpha subunit | ALP24_00908 | Not Available | Negative | 5525051 - 5525653 | 22390.2 |
| protocatechuate 3,4-dioxygenase, beta subunit | ALP24_00909 | Not Available | Negative | 5525665 - 5526429 | 28165.5 |
| pca operon transcriptional regulator pcaq | ALP24_00910 | Not Available | Negative | 5526522 - 5527442 | 33374.8 |
| hypothetical protein | ALP24_00911 | Not Available | Negative | 5527495 - 5527737 | 9021.85 |
| acyltransferase 3 | ALP24_00912 | Not Available | Negative | 5527795 - 5528865 | 40274.4 |
| membrane protein | ALP24_00913 | Not Available | Positive | 5529113 - 5529427 | 11364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









