Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | ALP24_01590 | Not Available | Positive | 5421537 - 5422100 | 21127.3 |
| hypothetical protein | ALP24_01591 | Not Available | Negative | 5422133 - 5422423 | 10931.8 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ALP24_01592 | Not Available | Positive | 5422518 - 5423627 | 40330.3 |
| extracellular solute-binding protein | ALP24_01593 | Not Available | Positive | 5423913 - 5424938 | 36831.6 |
| spermidine/putrescine abc-type transport system | ALP24_01594 | Not Available | Positive | 5424968 - 5425879 | 32774.2 |
| spermidine/putrescine abc-type transport system | ALP24_01595 | Not Available | Positive | 5425886 - 5426713 | 29675.4 |
| spermidine/putrescine abc-type transport system | ALP24_01596 | Not Available | Positive | 5426710 - 5427864 | 41739.2 |
| lysr family transcriptional regulator | ALP24_04806 | Not Available | Negative | 5427881 - 5428801 | 33691.4 |
| tartrate dehydrogenase | ALP24_01598 | Not Available | Positive | 5428896 - 5430017 | 41436.4 |
| lysr family transcriptional regulator | ALP24_04807 | Not Available | Negative | 5430014 - 5430499 | 18041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









