Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box histidine kinase/response regulator | ALP24_04184 | Not Available | Negative | 5385266 - 5386183 | 32924.2 |
| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex | ALP24_103127 | Not Available | Negative | 5387063 - 5387904 | 28826.3 |
| 2-oxoglutarate dehydrogenase, e1 component | ALP24_05255 | Not Available | Negative | 5387946 - 5390777 | 106524.0 |
| succinate dehydrogenase iron-sulfur subunit | ALP24_03283 | Not Available | Negative | 5391037 - 5391750 | 26467.1 |
| succinate dehydrogenase flavoprotein subunit | ALP24_03284 | Not Available | Negative | 5391754 - 5393526 | 63396.4 |
| succinate dehydrogenase hydrophobic, membrane anchor protein | ALP24_03285 | Not Available | Negative | 5393530 - 5393904 | 13847.2 |
| succinate dehydrogenase, cytochrome subunit | ALP24_03286 | Not Available | Negative | 5393892 - 5394149 | 9143.58 |
| hypothetical protein | ALP24_05256 | Not Available | Negative | 5394419 - 5394529 | 3755.52 |
| citrate synthase | ALP24_03287 | Not Available | Positive | 5394629 - 5395918 | 47577.7 |
| Trna-ser | Not Available | Not Available | Positive | 5396092 - 5396182 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









