Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate biosynthesis protein alg44 | ALP24_02838 | Not Available | Negative | 5300533 - 5301705 | 41996.6 |
| alginate biosynthesis protein alg8 | ALP24_05131 | Not Available | Negative | 5301746 - 5303230 | 56137.1 |
| gdp-mannose 6-dehydrogenase | ALP24_02840 | Not Available | Negative | 5303328 - 5304128 | 29264.8 |
| transposase | ALP24_05376 | Not Available | Negative | 5305302 - 5306318 | 37324.6 |
| rna polymerase-binding transcription factor dksa | ALP24_03800 | Not Available | Negative | 5306554 - 5306994 | 17055.3 |
| hypothetical protein | ALP24_05408 | Not Available | Positive | 5307343 - 5308254 | 33134.6 |
| hypothetical protein | ALP24_05603 | Not Available | Negative | 5308280 - 5308570 | 10742.8 |
| hypothetical protein | ALP24_03944 | Not Available | Positive | 5308572 - 5308772 | 7618.42 |
| type i secretion system atpase, prtd | ALP24_04468 | Not Available | Negative | 5309295 - 5309914 | 22718.2 |
| protease inhibitor inh | ALP24_00313 | Not Available | Negative | 5309953 - 5310336 | 14003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









