Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | ALP24_05429 | Not Available | Negative | 5275050 - 5275211 | 5989.21 |
| non-ribosomal peptide synthetase | ALP24_05347 | Not Available | Positive | 5275241 - 5276311 | 36881.3 |
| isocitrate dehydrogenase, proteinp-dependent | ALP24_04957 | Not Available | Negative | 5276623 - 5277519 | 32189.3 |
| isocitrate dehydrogenase, proteinp-dependent | ALP24_02217 | Not Available | Negative | 5277543 - 5277866 | 11325.4 |
| ribosomal rna large subunit methyltransferase j | ALP24_04048 | Not Available | Positive | 5278096 - 5278938 | 31943.7 |
| hypothetical protein | ALP24_03752 | Not Available | Positive | 5279125 - 5280876 | 66410.5 |
| hypothetical protein | ALP24_03753 | Not Available | Positive | 5280848 - 5281975 | 42948.0 |
| hypothetical protein | ALP24_03754 | Not Available | Positive | 5281976 - 5282911 | 35163.8 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | ALP24_04295 | Not Available | Positive | 5283048 - 5283605 | 19193.2 |
| trifunctional protein: transcriptional repressor of puta and putp / proline dehydrogenase / pyrroline-5-carboxylate dehydrogenase | ALP24_04296 | Not Available | Positive | 5283563 - 5284924 | 48612.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









