Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas/gaf/ggdef/eal domain protein | ALP24_00421 | Not Available | Negative | 5081807 - 5084005 | 81921.8 |
| ggdef domain-containing protein | ALP24_101066 | Not Available | Positive | 5084362 - 5085939 | 57649.8 |
| iclr family transcriptional regulator | ALP24_00422 | Not Available | Negative | 5086021 - 5086872 | 29800.2 |
| homogentisate 1,2-dioxygenase | ALP24_00423 | Not Available | Positive | 5086953 - 5088257 | 48211.2 |
| fumarylacetoacetate hydrolase | ALP24_00424 | Not Available | Positive | 5088257 - 5089552 | 46690.8 |
| aefr-like transcriptional repressor | ALP24_00425 | Not Available | Negative | 5089573 - 5090187 | 23463.2 |
| hypothetical protein | ALP24_00426 | Not Available | Positive | 5090382 - 5091482 | 41692.4 |
| major facilitator super family | ALP24_00427 | Not Available | Positive | 5091570 - 5092823 | 44683.3 |
| lysr family transcriptional regulator | ALP24_00428 | Not Available | Positive | 5092889 - 5093272 | 14429.8 |
| helix-turn-helix, fis-type | ALP24_100955 | Not Available | Positive | 5093218 - 5093817 | 22383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









