Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate permease | ALP24_00414 | Not Available | Negative | 5071422 - 5072774 | 47459.3 |
| gluconokinase | ALP24_00415 | Not Available | Negative | 5072873 - 5073250 | 13585.2 |
| gluconate utilization system regulator gntr | ALP24_00416 | Not Available | Positive | 5073641 - 5074657 | 36488.1 |
| hypothetical protein | ALP24_101718 | Not Available | Positive | 5074711 - 5074830 | 4109.0 |
| putative 6-phosphogluconolactonase, ybhe-type | ALP24_100268 | Not Available | Positive | 5074899 - 5075957 | 38414.1 |
| glcg protein | ALP24_00417 | Not Available | Negative | 5076005 - 5076418 | 13851.6 |
| glycolate oxidase fad binding subunit | ALP24_00418 | Not Available | Negative | 5077670 - 5078746 | 38669.4 |
| glycolate oxidase, subunit glcd | ALP24_00419 | Not Available | Negative | 5078746 - 5080161 | 50621.2 |
| hypothetical protein | ALP24_04494 | Not Available | Positive | 5080396 - 5080527 | 5024.92 |
| 4-hydroxyphenylpyruvate dioxygenase | ALP24_00420 | Not Available | Positive | 5080670 - 5081746 | 40081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









