Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ribose 5-phosphate isomerase b | ALP24_100314 | Not Available | Positive | 5000837 - 5001346 | 17991.3 |
| deor family transcriptional regulator with sugar-binding domain | ALP24_02754 | Not Available | Positive | 5001414 - 5002394 | 35408.7 |
| quinoprotein | ALP24_05099 | Not Available | Positive | 5002467 - 5003946 | 53879.2 |
| glycoside hydrolase family 18 protein | ALP24_00730 | Not Available | Positive | 5004090 - 5006516 | 88758.5 |
| hypothetical protein | ALP24_103038 | Not Available | Positive | 5006687 - 5006890 | 7737.31 |
| pi-plc x phosphodiestherase-like domain protein | ALP24_101345 | Not Available | Positive | 5007267 - 5014421 | 266594.0 |
| electron transfer flavoprotein, beta subunit | ALP24_00731 | Not Available | Negative | 5014456 - 5015229 | 27132.8 |
| electron transfer flavoprotein, alpha subunit | ALP24_00732 | Not Available | Negative | 5015219 - 5016439 | 43375.0 |
| 4fe-4s ferredoxin | ALP24_00733 | Not Available | Negative | 5016439 - 5018172 | 62545.8 |
| non-ribosomal peptide synthase:amino acid adenylation | ALP24_04166 | Not Available | Negative | 5018481 - 5019364 | 32290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









