Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALP24_05308 | Not Available | Positive | 4979498 - 4980349 | 31161.1 |
| putative esterase | ALP24_03520 | Not Available | Positive | 4980438 - 4981055 | 22684.3 |
| dna topoisomerase 4 subunit b | ALP24_03521 | Not Available | Positive | 4981132 - 4983036 | 69465.9 |
| hypothetical protein | ALP24_03522 | Not Available | Positive | 4983033 - 4984010 | 35630.4 |
| hypothetical protein | ALP24_03523 | Not Available | Positive | 4984007 - 4984528 | 18648.4 |
| dna topoisomerase iv subunit a | ALP24_05309 | Not Available | Positive | 4984491 - 4986794 | 84589.8 |
| type iii secretion system effector hopag1 | ALP24_100562 | Not Available | Positive | 4987705 - 4989829 | 77953.1 |
| endoglucanase | ALP24_100706 | Not Available | Positive | 4989935 - 4991218 | 43541.8 |
| chemotaxis response regulator protein-glutamate methylesterase 1 | ALP24_100117 | Not Available | Negative | 4991351 - 4992427 | 38020.6 |
| putative chemoreceptor glutamine deamidase ched | ALP24_04346 | Not Available | Negative | 4992390 - 4992923 | 19966.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









