Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00434 | Not Available | Positive | 4819417 - 4819614 | 7612.21 |
| putative yjia-like gtp-binding protein | ALP24_00435 | Not Available | Positive | 4819849 - 4820625 | 28103.8 |
| serine hydroxymethyltransferase | ALP24_04495 | Not Available | Negative | 4820723 - 4821988 | 45306.1 |
| effector protein hopae1 | ALP24_00437 | Not Available | Positive | 4822319 - 4825057 | 96910.0 |
| amidase | ALP24_04496 | Not Available | Negative | 4825142 - 4826869 | 62035.0 |
| phenol degradation meta-pathway protein | ALP24_00439 | Not Available | Negative | 4826641 - 4827576 | 33666.8 |
| transcriptional regulator, luxr family | ALP24_00440 | Not Available | Negative | 4827673 - 4828665 | 36722.8 |
| pas/ggdef/eal domain protein | ALP24_04497 | Not Available | Negative | 4828804 - 4831461 | 98442.7 |
| rna polymerase sigma factor rpod | ALP24_04500 | Not Available | Negative | 4831528 - 4833378 | 69492.0 |
| dna primase | ALP24_04501 | Not Available | Negative | 4833553 - 4834074 | 18709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









