Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence-associated protein | ALP24_01926 | Not Available | Positive | 4810090 - 4810320 | 8581.03 |
| ribonuclease vapc | ALP24_01927 | Not Available | Positive | 4810320 - 4810724 | 14947.1 |
| hypothetical protein | ALP24_100835 | Not Available | Negative | 4810911 - 4811486 | 19966.7 |
| hypothetical protein | ALP24_101100 | Not Available | Positive | 4811485 - 4811673 | 7020.65 |
| sigma-70 region 2:sigma-70 region 4 | ALP24_01928 | Not Available | Positive | 4811813 - 4812421 | 23583.3 |
| transcriptional activator chrr | ALP24_01929 | Not Available | Positive | 4812421 - 4813083 | 24020.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALP24_04884 | Not Available | Negative | 4813106 - 4814284 | 40891.3 |
| dna repair protein rada | ALP24_00431 | Not Available | Positive | 4816095 - 4816634 | 19316.5 |
| pilz domain protein | ALP24_00432 | Not Available | Negative | 4816649 - 4817173 | 19781.8 |
| carbon starvation protein csta | ALP24_00433 | Not Available | Positive | 4817563 - 4819389 | 65044.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









