Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein hfq | ALP24_01069 | Not Available | Negative | 4771738 - 4771998 | 9354.31 |
| trna dimethylallyltransferase | ALP24_04653 | Not Available | Negative | 4772092 - 4773063 | 35536.8 |
| dna mismatch repair protein mutl | ALP24_01071 | Not Available | Negative | 4773064 - 4775010 | 71270.0 |
| n-acetylmuramoyl-l-alanine amidase | ALP24_01072 | Not Available | Negative | 4775010 - 4775345 | 12114.3 |
| n-acetylmuramoyl-l-alanine amidase | ALP24_01073 | Not Available | Negative | 4775314 - 4776429 | 39435.0 |
| yjee family atpase | ALP24_01074 | Not Available | Negative | 4776444 - 4776914 | 17028.6 |
| yjef-like, hydroxyethylthiazole kinase-related protein | ALP24_01075 | Not Available | Negative | 4776902 - 4778377 | 49660.2 |
| epoxyqueuosine reductase | ALP24_04654 | Not Available | Positive | 4778357 - 4779529 | 43633.2 |
| hypothetical protein | ALP24_01077 | Not Available | Negative | 4779728 - 4780339 | 22336.3 |
| oligoribonuclease | ALP24_01078 | Not Available | Negative | 4780436 - 4780753 | 12466.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









