Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | ALP24_04581 | Not Available | Negative | 4737116 - 4738357 | 45204.1 |
| senescence marker protein-30 | ALP24_00801 | Not Available | Positive | 4738552 - 4739424 | 31548.2 |
| l-arabinose abc transporter periplasmic l-arabinose-binding protein | ALP24_00802 | Not Available | Positive | 4739618 - 4740004 | 13101.2 |
| l-arabinose abc transporter periplasmic l-arabinose-binding protein | ALP24_00803 | Not Available | Positive | 4740009 - 4740638 | 22611.8 |
| arabinose import atp-binding protein arag | ALP24_04582 | Not Available | Positive | 4740678 - 4741046 | 13073.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | ALP24_01350 | Not Available | Positive | 4741047 - 4741316 | 9725.12 |
| putative chitin-binding protein | ALP24_01351 | Not Available | Negative | 4741475 - 4742206 | 27267.7 |
| lactoylglutathione lyase and related lyase | ALP24_100194 | Not Available | Negative | 4742381 - 4742767 | 14437.4 |
| 2og-fe oxygenase protein | ALP24_04738 | Not Available | Negative | 4742769 - 4743824 | 39326.4 |
| isochorismatase hydrolase | ALP24_01353 | Not Available | Negative | 4744010 - 4744648 | 23339.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









