Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc-type transport system, atp-binding protein | ALP24_00790 | Not Available | Positive | 4727023 - 4727483 | 17012.7 |
| histidine ammonia-lyase | ALP24_00791 | Not Available | Positive | 4727490 - 4729037 | 54540.9 |
| dna polymerase | ALP24_00792 | Not Available | Positive | 4729092 - 4730942 | 68407.2 |
| silent information regulator protein sir2 | ALP24_00793 | Not Available | Negative | 4731110 - 4731904 | 28299.9 |
| hypothetical protein | ALP24_00794 | Not Available | Negative | 4732124 - 4732963 | 32340.5 |
| putative dna modification/repair radical sam protein | ALP24_00795 | Not Available | Negative | 4732960 - 4734183 | 44877.9 |
| cation abc transporter atp-binding protein | ALP24_00796 | Not Available | Positive | 4734540 - 4734917 | 13247.8 |
| metal ion abc-type transport system, atp-binding protein | ALP24_00797 | Not Available | Positive | 4734868 - 4735293 | 15606.8 |
| abc-3-like protein | ALP24_00798 | Not Available | Positive | 4735290 - 4736159 | 30224.5 |
| metal ion abc-type transport system, periplasmic substrate-binding protein | ALP24_00799 | Not Available | Positive | 4736172 - 4737068 | 32183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









