Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00026 | Not Available | Negative | 4584931 - 4585134 | 7310.77 |
| lysr family transcriptional regulator yeie | ALP24_102679 | Not Available | Negative | 4585421 - 4586341 | 33684.6 |
| c4-dicarboxylate transporter/malic acid transport protein | ALP24_04403 | Not Available | Positive | 4586263 - 4587624 | 48656.5 |
| chloride channel protein | ALP24_04404 | Not Available | Negative | 4587780 - 4589120 | 47533.8 |
| indole-3-glycerol phosphate synthase | ALP24_02715 | Not Available | Positive | 4589504 - 4590231 | 26145.4 |
| pas protein | ALP24_05093 | Not Available | Negative | 4590361 - 4592583 | 82654.7 |
| monooxygenase, ntaa/snaa/soxa family | ALP24_02717 | Not Available | Positive | 4593416 - 4594762 | 49760.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALP24_02718 | Not Available | Positive | 4594759 - 4595718 | 34126.7 |
| aliphatic sulfonates family abc transporter periplasmic substrate-binding protein | ALP24_02719 | Not Available | Positive | 4595795 - 4596769 | 35362.3 |
| amidase | ALP24_05094 | Not Available | Negative | 4596830 - 4596931 | 3576.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









