Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | ALP24_01617 | Not Available | Positive | 4515189 - 4515839 | 24199.4 |
| histidine kinase, hamp region:bacterial chemotaxis sensory transducer | ALP24_04810 | Not Available | Negative | 4516697 - 4518628 | 68877.1 |
| secretion protein hlyd | ALP24_01619 | Not Available | Positive | 4518943 - 4520184 | 44228.8 |
| rnd-type multidrug efflux system, transporter protein mexf | ALP24_01620 | Not Available | Positive | 4520197 - 4523388 | 115292.0 |
| rnd-type multidrug efflux system, outer membrane lipoprotein oprn | ALP24_01621 | Not Available | Positive | 4523513 - 4524856 | 48772.8 |
| putative pep-cterm system tpr-repeat lipoprotein | ALP24_01622 | Not Available | Positive | 4524897 - 4525790 | 31726.1 |
| putative insecticidal toxin protein | ALP24_05413 | Not Available | Positive | 4525816 - 4526387 | 20596.1 |
| snf2-like protein | ALP24_103347 | Not Available | Negative | 4526388 - 4526709 | 11583.1 |
| snf2-like protein | ALP24_02551 | Not Available | Negative | 4526703 - 4527359 | 22622.3 |
| snf2-like protein | ALP24_101999 | Not Available | Negative | 4527287 - 4527622 | 12735.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









