Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | ALP24_05079 | Not Available | Negative | 4392850 - 4394049 | 44144.1 |
| glycerophosphoryl diester phosphodiesterase, periplasmic | ALP24_101957 | Not Available | Negative | 4394071 - 4394271 | 7106.47 |
| 2-hydroxyacid dehydrogenase | ALP24_05080 | Not Available | Positive | 4394265 - 4395197 | 32543.2 |
| type 1 glutamine amidotransferase -like domain protein | ALP24_02663 | Not Available | Positive | 4395307 - 4396035 | 26298.4 |
| antibiotic biosynthesis monooxygenase protein | ALP24_02664 | Not Available | Positive | 4396131 - 4396358 | 8665.03 |
| short-chain fatty acid transporter | ALP24_02665 | Not Available | Negative | 4396363 - 4397526 | 41552.6 |
| short-chain fatty acid transporter | ALP24_02666 | Not Available | Negative | 4397547 - 4397783 | 8422.26 |
| hypothetical protein | ALP24_01157 | Not Available | Negative | 4398078 - 4399193 | 41927.7 |
| cysteine synthase | ALP24_100261 | Not Available | Positive | 4399173 - 4400138 | 33620.9 |
| cysteine synthase | ALP24_04680 | Not Available | Positive | 4400149 - 4400253 | 3835.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









