Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmc | ALP24_02672 | Not Available | Positive | 4305820 - 4306623 | 29637.1 |
| cytochrome c-type bioproteinsis protein ccme | ALP24_02673 | Not Available | Positive | 4306793 - 4307266 | 16173.9 |
| cytochrome c-type bioproteinsis protein ccmf, heme lyase component | ALP24_02674 | Not Available | Positive | 4307270 - 4309243 | 71726.1 |
| cytochrome c-type bioproteinsis protein cycl | ALP24_02675 | Not Available | Positive | 4309773 - 4310243 | 17606.3 |
| cytochrome c heme lyase subunit ccmh | ALP24_100458 | Not Available | Positive | 4310240 - 4311400 | 41444.9 |
| putative lipoprotein | ALP24_02676 | Not Available | Positive | 4311689 - 4311847 | 6034.87 |
| sulfate/thiosulfate abc-type transporter, periplasmic substrate-binding protein | ALP24_02677 | Not Available | Negative | 4311914 - 4312912 | 36688.4 |
| ion transport protein | ALP24_02678 | Not Available | Negative | 4313016 - 4313849 | 31103.8 |
| hypothetical protein | ALP24_01793 | Not Available | Negative | 4313971 - 4314198 | 7800.49 |
| putative dodecin | ALP24_01794 | Not Available | Negative | 4314344 - 4314559 | 7935.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









