Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar epimerase/dehydratase wbpm | ALP24_04975 | Not Available | Negative | 4185155 - 4187152 | 73889.7 |
| glycosyl transferase, group 4 protein | ALP24_100245 | Not Available | Negative | 4187254 - 4188264 | 36157.9 |
| putative udp-glucose 4-epimerase | ALP24_02260 | Not Available | Negative | 4188257 - 4188847 | 21443.1 |
| putative udp-glucose 4-epimerase | ALP24_02261 | Not Available | Negative | 4188896 - 4189255 | 12301.6 |
| putative exonuclease of the beta-lactamase fold involved in rna processing | ALP24_02262 | Not Available | Negative | 4189436 - 4189912 | 17315.9 |
| putative exonuclease of the beta-lactamase fold involved in rna processing | ALP24_02263 | Not Available | Negative | 4189936 - 4190868 | 34382.4 |
| methyl-accepting chemotaxis protein | ALP24_100435 | Not Available | Negative | 4191207 - 4192832 | 58435.7 |
| hypothetical protein | ALP24_101809 | Not Available | Positive | 4192962 - 4193087 | 4595.64 |
| hypothetical protein | ALP24_03014 | Not Available | Positive | 4193244 - 4193477 | 8205.57 |
| zapa-like cell division protein | ALP24_100158 | Not Available | Positive | 4193474 - 4193776 | 10867.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









