Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | ALP24_00552 | Not Available | Negative | 3977630 - 3978070 | 17037.3 |
| ribosomal protein s12 methylthiotransferase rimo | ALP24_00553 | Not Available | Negative | 3978949 - 3979509 | 19993.0 |
| type iii effector hopa1 | ALP24_00554 | Not Available | Negative | 3979839 - 3980969 | 41694.6 |
| type iii chaperone protein shca | ALP24_00555 | Not Available | Negative | 3981024 - 3981422 | 15080.4 |
| hypothetical protein | ALP24_05641 | Not Available | Negative | 3981700 - 3983382 | 65476.4 |
| l-arabinose abc transporter membrane protein | ALP24_05474 | Not Available | Negative | 3983698 - 3984069 | 13512.7 |
| arabinose import atp-binding protein arag | ALP24_04009 | Not Available | Negative | 3983999 - 3984244 | 8795.64 |
| hypothetical protein | ALP24_03070 | Not Available | Positive | 3985145 - 3985336 | 7022.38 |
| hypothetical protein | ALP24_03200 | Not Available | Positive | 3987787 - 3988247 | 16815.0 |
| short chain dehydrogenase/reductase family oxidoreductase | ALP24_03201 | Not Available | Positive | 3988350 - 3989045 | 24548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









