Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding lysm:peptidase m23b | ALP24_00537 | Not Available | Positive | 3961353 - 3962216 | 30145.1 |
| rna polymerase sigma factor rpos | ALP24_00538 | Not Available | Positive | 3962320 - 3963327 | 38195.7 |
| hypothetical protein | ALP24_102885 | Not Available | Positive | 3963731 - 3963874 | 5598.12 |
| 4fe-4s ferredoxin | ALP24_00539 | Not Available | Negative | 3963871 - 3964194 | 11969.1 |
| dna mismatch repair protein muts | ALP24_04518 | Not Available | Negative | 3964454 - 3967048 | 96004.6 |
| competence/damage inducible protein cina | ALP24_102712 | Not Available | Positive | 3967073 - 3967417 | 12795.3 |
| cina | ALP24_00540 | Not Available | Positive | 3967431 - 3968009 | 20549.7 |
| protein reca | ALP24_00541 | Not Available | Positive | 3968103 - 3969167 | 37746.6 |
| regulatory protein recx | ALP24_00542 | Not Available | Positive | 3969173 - 3969628 | 15906.1 |
| hypothetical protein | ALP24_00543 | Not Available | Negative | 3969646 - 3970785 | 43276.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









