Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_03452 | Not Available | Positive | 3920390 - 3920611 | 8158.1 |
| yd repeat-containing protein | ALP24_03453 | Not Available | Negative | 3921486 - 3922430 | 34637.8 |
| res domain protein | ALP24_100207 | Not Available | Negative | 3922463 - 3922924 | 16927.2 |
| putative toxin-antitoxin system antitoxin component | ALP24_03749 | Not Available | Negative | 3922921 - 3923370 | 16833.1 |
| chec-like chemotactic response regulator rotein | ALP24_03750 | Not Available | Positive | 3923636 - 3924640 | 35903.7 |
| sensory box domain protein | ALP24_03751 | Not Available | Positive | 3924644 - 3925126 | 18237.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALP24_102610 | Not Available | Positive | 3925223 - 3925666 | 15693.9 |
| bifunctional uridylyltransferase/uridylyl-removing enzyme | ALP24_04513 | Not Available | Negative | 3925667 - 3927795 | 81809.6 |
| methionine aminopeptidase | ALP24_100267 | Not Available | Negative | 3927792 - 3928547 | 27663.3 |
| hypothetical protein | ALP24_103258 | Not Available | Positive | 3928523 - 3928627 | 3978.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









