Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binary cytotoxin component | ALP24_01302 | Not Available | Positive | 3894247 - 3895257 | 37897.6 |
| ps-ii repair super protein | ALP24_01303 | Not Available | Negative | 3895315 - 3895932 | 22946.0 |
| hypothetical protein | ALP24_01304 | Not Available | Negative | 3895958 - 3896671 | 25665.1 |
| periplasmic beta-d-glucoside glucohydrolase | ALP24_01305 | Not Available | Positive | 3896972 - 3897787 | 29385.5 |
| beta-d-glucoside glucohydrolase | ALP24_01306 | Not Available | Positive | 3897733 - 3899277 | 55962.7 |
| dna internalization-related competence protein comec/rec2 | ALP24_05630 | Not Available | Negative | 3899322 - 3899909 | 21691.0 |
| abc-type multidrug efflux system, permease protein | ALP24_04352 | Not Available | Negative | 3900029 - 3900817 | 29067.7 |
| abc-type multidrug efflux system, atp-bindig protein | ALP24_04353 | Not Available | Negative | 3900814 - 3901764 | 35033.6 |
| glutathione s-transferase | ALP24_05631 | Not Available | Negative | 3901930 - 3902577 | 24119.8 |
| hypothetical protein | ALP24_102678 | Not Available | Negative | 3902623 - 3902769 | 4937.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









