Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_03388 | Not Available | Negative | 3820953 - 3821477 | 19312.1 |
| atp-binding region, atpase-like:histidine kinase | ALP24_03389 | Not Available | Positive | 3821686 - 3822861 | 42380.2 |
| two-component hybrid sensor histidine kinase/response regulator | ALP24_03390 | Not Available | Positive | 3823523 - 3824347 | 29773.5 |
| sensory box histidine kinase/response regulator | ALP24_101611 | Not Available | Positive | 3824804 - 3825850 | 37766.4 |
| two-component system regulatory protein | ALP24_102417 | Not Available | Positive | 3826099 - 3826284 | 7139.82 |
| type iii effector hopx1 | ALP24_101141 | Not Available | Negative | 3826285 - 3827422 | 40666.2 |
| type iii effector protein avrb3 | ALP24_102282 | Not Available | Negative | 3827572 - 3828561 | 37252.9 |
| type iii helper protein hrpk1 | ALP24_04776 | Not Available | Negative | 3828738 - 3830717 | 69258.7 |
| type iii secretion system helper protein hrpk1 | ALP24_04777 | Not Available | Negative | 3830452 - 3831081 | 21713.7 |
| rna polymerase sigma factor | ALP24_04778 | Not Available | Negative | 3831125 - 3831679 | 21132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









