Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc-type transport system | ALP24_00974 | Not Available | Negative | 3736445 - 3737017 | 21077.7 |
| branched-chain amino acid abc-type transport system | ALP24_00975 | Not Available | Negative | 3737141 - 3738016 | 32443.6 |
| amino acid/amide abc transporter membrane protein 2 | ALP24_00976 | Not Available | Negative | 3738013 - 3739326 | 47193.4 |
| branched-chain amino acid abc-type transport system | ALP24_00977 | Not Available | Negative | 3739329 - 3740246 | 32735.2 |
| extracellular ligand-binding receptor | ALP24_04623 | Not Available | Negative | 3740405 - 3741667 | 44409.1 |
| lysr family transcriptional regulator | ALP24_00979 | Not Available | Positive | 3742041 - 3742946 | 34354.2 |
| nicotinate phosphoribosyltransferase | ALP24_00980 | Not Available | Positive | 3743046 - 3744269 | 46707.5 |
| nh synthetase | ALP24_00981 | Not Available | Positive | 3744296 - 3744817 | 18159.8 |
| nh synthetase | ALP24_00982 | Not Available | Positive | 3744814 - 3745152 | 12168.4 |
| blue copper domain-containing protein | ALP24_00983 | Not Available | Negative | 3745306 - 3745752 | 16031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









