Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, lysr:lysr, substrate-binding | ALP24_00758 | Not Available | Positive | 3714618 - 3715517 | 33220.0 |
| hypothetical protein | ALP24_00759 | Not Available | Positive | 3715656 - 3716339 | 25031.8 |
| hypothetical protein | ALP24_04574 | Not Available | Negative | 3716348 - 3716455 | 3721.6 |
| ggdef domain-containing protein | ALP24_04575 | Not Available | Positive | 3716684 - 3718657 | 71086.4 |
| transcriptional regulator gntr | ALP24_00761 | Not Available | Positive | 3718730 - 3719443 | 26201.7 |
| ferredoxin:oxidoreductase fad -binding:oxidoreductase fad-binding region | ALP24_00762 | Not Available | Negative | 3719444 - 3720394 | 34660.2 |
| vanillate monooxygenase, oxygenase subunit | ALP24_00763 | Not Available | Negative | 3720468 - 3720851 | 14077.9 |
| vanillate o-demethylase, oxygenase subunit | ALP24_00764 | Not Available | Negative | 3720817 - 3721533 | 26496.5 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALP24_00765 | Not Available | Negative | 3721679 - 3722566 | 32050.6 |
| peptidase c26 protein | ALP24_00766 | Not Available | Positive | 3722694 - 3723443 | 26788.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









