Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator with aspartate aminotransferase domain | ALP24_02059 | Not Available | Negative | 3526388 - 3526675 | 10639.0 |
| gntr family transcriptional regulator with aspartate aminotransferase domain | ALP24_02060 | Not Available | Negative | 3526672 - 3527814 | 40975.7 |
| hypothetical protein | ALP24_02061 | Not Available | Positive | 3527974 - 3528240 | 10455.5 |
| fad dependent oxidoreductase | ALP24_04922 | Not Available | Negative | 3528245 - 3529660 | 51450.7 |
| putative methyltransferase | ALP24_02063 | Not Available | Positive | 3529652 - 3530017 | 13453.2 |
| transcriptional regulator, asnc family | ALP24_02064 | Not Available | Negative | 3530025 - 3530513 | 18687.8 |
| d-amino acid dehydrogenase small subunit | ALP24_02065 | Not Available | Positive | 3530671 - 3531972 | 47221.7 |
| endoribonuclease l-psp | ALP24_02066 | Not Available | Positive | 3531944 - 3532297 | 12927.7 |
| alanine racemase | ALP24_101823 | Not Available | Positive | 3533098 - 3533445 | 12815.6 |
| helix-turn-helix motif protein | ALP24_02067 | Not Available | Positive | 3533570 - 3534118 | 19851.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









