Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | ALP24_01497 | Not Available | Negative | 3483654 - 3484154 | 18422.4 |
| type iv pilus assembly protein pilq | ALP24_04775 | Not Available | Negative | 3484177 - 3486375 | 78992.5 |
| type iv pilus assembly protein pilp | ALP24_01499 | Not Available | Negative | 3486330 - 3486857 | 19172.8 |
| type iv pilus assembly protein pilo | ALP24_01500 | Not Available | Negative | 3486854 - 3487477 | 23173.0 |
| type iv pilus assembly protein piln | ALP24_01501 | Not Available | Negative | 3487474 - 3488055 | 21621.4 |
| type iv pilus assembly protein pilm | ALP24_01502 | Not Available | Negative | 3488055 - 3489119 | 38136.9 |
| penicillin-binding protein 1a | ALP24_01503 | Not Available | Positive | 3489326 - 3491770 | 89480.5 |
| cold shock dna-binding protein | ALP24_00473 | Not Available | Negative | 3491936 - 3492148 | 7626.98 |
| hypothetical protein | ALP24_00474 | Not Available | Negative | 3492444 - 3492863 | 15074.9 |
| threonine--trna ligase | ALP24_00475 | Not Available | Positive | 3493099 - 3495021 | 72623.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









