Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa/motb | ALP24_03611 | Not Available | Negative | 3451256 - 3452623 | 48202.8 |
| exonuclease iii | ALP24_05338 | Not Available | Negative | 3452760 - 3453671 | 34803.2 |
| gnat family acetyltransferase | ALP24_05339 | Not Available | Positive | 3453657 - 3454436 | 29315.4 |
| hypothetical protein | ALP24_03614 | Not Available | Positive | 3454451 - 3456220 | 64909.9 |
| hypothetical protein | ALP24_05341 | Not Available | Positive | 3456217 - 3459906 | 131395.0 |
| lysr family transcriptional regulator | ALP24_100208 | Not Available | Positive | 3459936 - 3460943 | 36948.0 |
| putative thiol peroxidase | ALP24_03615 | Not Available | Positive | 3461034 - 3461534 | 17295.5 |
| cation/multidrug rnd-type efflux system, membrane fusion protein | ALP24_03616 | Not Available | Positive | 3461681 - 3462997 | 47048.6 |
| multidrug rnd efflux transporter, permease mdtb | ALP24_03617 | Not Available | Positive | 3462994 - 3463422 | 15129.7 |
| cation/multidrug rnd-type efflux system, acrb/acrd/acrf family plasma membrane protein | ALP24_03618 | Not Available | Positive | 3463425 - 3466112 | 97103.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









