Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20:peptidase m20 | ALP24_04110 | Not Available | Negative | 3402369 - 3402726 | 12372.8 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | ALP24_01822 | Not Available | Positive | 3402727 - 3403288 | 19376.7 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | ALP24_01823 | Not Available | Positive | 3403298 - 3404380 | 38678.3 |
| transglycosylase | ALP24_01824 | Not Available | Positive | 3404717 - 3404962 | 8241.63 |
| putative lipoprotein | ALP24_100220 | Not Available | Positive | 3405019 - 3405588 | 20649.3 |
| aldose 1-epimerase | ALP24_01825 | Not Available | Negative | 3405609 - 3406520 | 33762.0 |
| thioesterase superfamily | ALP24_01826 | Not Available | Negative | 3406611 - 3407012 | 14478.4 |
| l-proline/glycine betaine transporter prop | ALP24_100415 | Not Available | Positive | 3406819 - 3408732 | 69306.6 |
| phosphate abc-type transport system, periplasmic substrate-binding protein psts-2 | ALP24_01827 | Not Available | Positive | 3408899 - 3410008 | 38736.3 |
| phosphate abc-type transport system, permease protein pstc | ALP24_01828 | Not Available | Positive | 3410039 - 3412342 | 83324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









