Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, molybdopterin-binding subunit | ALP24_102946 | Not Available | Negative | 3353575 - 3354525 | 33319.9 |
| aldehyde oxidase/xantine dehydrogenase, iron-sulfur cluster-binding subunit | ALP24_00042 | Not Available | Negative | 3354522 - 3355196 | 23312.8 |
| sugar abc-type transport system, periplasmic substrate-binding protein | ALP24_00043 | Not Available | Negative | 3355586 - 3356512 | 33309.2 |
| hydroxypyruvate isomerase | ALP24_00044 | Not Available | Negative | 3356605 - 3357393 | 28637.2 |
| gfo/idh/moca family oxidoreductase | ALP24_00045 | Not Available | Negative | 3357390 - 3358412 | 36167.1 |
| sigma-54 dependent transcriptional regulator | ALP24_00046 | Not Available | Positive | 3358597 - 3360591 | 72439.6 |
| outer membrane ligand receptor | ALP24_00047 | Not Available | Positive | 3361290 - 3363743 | 87936.4 |
| amino acid abc transporter, permease protein | ALP24_00048 | Not Available | Positive | 3363786 - 3364775 | 36313.0 |
| phosphate abc transporter atp-binding protein | ALP24_00049 | Not Available | Positive | 3364768 - 3365553 | 28955.1 |
| polar amino acid abc-type transport system, periplasmic substrate-binding protein | ALP24_00050 | Not Available | Positive | 3365582 - 3366511 | 32847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









