Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc export system, permease | ALP24_02548 | Not Available | Negative | 3310783 - 3311577 | 29551.6 |
| gdp-mannose 4,6 dehydratase | ALP24_02549 | Not Available | Positive | 3312061 - 3312678 | 22730.1 |
| gdp-mannose 4,6 dehydratase | ALP24_02550 | Not Available | Positive | 3312683 - 3313147 | 17477.1 |
| putative dependent epimerase/dehydratase protein | ALP24_05050 | Not Available | Positive | 3313144 - 3313478 | 11536.9 |
| hypothetical protein | ALP24_101516 | Not Available | Negative | 3313770 - 3314810 | 37900.9 |
| hypothetical protein | ALP24_102042 | Not Available | Positive | 3314970 - 3315221 | 8620.91 |
| stability/partitioning determinant | ALP24_05035 | Not Available | Negative | 3315775 - 3315963 | 6721.33 |
| zinc import atp-binding protein znuc | ALP24_05409 | Not Available | Positive | 3315984 - 3316214 | 8260.48 |
| zinc abc-type transport system, permease protein znub | ALP24_03801 | Not Available | Positive | 3316159 - 3316818 | 23024.6 |
| putative lipoprotein | ALP24_03802 | Not Available | Positive | 3317035 - 3317751 | 25900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









