Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impm | ALP24_04189 | Not Available | Negative | 3228195 - 3229118 | 34731.4 |
| hypothetical protein | ALP24_04190 | Not Available | Negative | 3229150 - 3230841 | 62476.0 |
| hypothetical protein | ALP24_04191 | Not Available | Negative | 3230862 - 3233075 | 82139.1 |
| type vi secretion system protein impk | ALP24_04192 | Not Available | Negative | 3233106 - 3233819 | 26785.4 |
| type vi secretion system protein impj/vase | ALP24_04193 | Not Available | Negative | 3233816 - 3235159 | 50330.4 |
| hypothetical protein | ALP24_04194 | Not Available | Negative | 3235156 - 3235911 | 27501.6 |
| aaa atpase, central region | ALP24_05576 | Not Available | Negative | 3235937 - 3238540 | 95251.3 |
| hypothetical protein | ALP24_04196 | Not Available | Negative | 3238537 - 3239484 | 36230.5 |
| hypothetical protein | ALP24_04197 | Not Available | Negative | 3239571 - 3241403 | 69724.7 |
| type vi secretion system protein evpe | ALP24_04198 | Not Available | Negative | 3241403 - 3241885 | 18156.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









