Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase | ALP24_04895 | Not Available | Positive | 3216819 - 3217341 | 19508.8 |
| relaxase | ALP24_04546 | Not Available | Negative | 3217342 - 3218262 | 33661.7 |
| sel1-like repeat protein | ALP24_102319 | Not Available | Negative | 3218381 - 3219013 | 23418.6 |
| putative lipoprotein | ALP24_04185 | Not Available | Negative | 3219510 - 3220532 | 38235.5 |
| phospholipase d protein | ALP24_04186 | Not Available | Negative | 3220534 - 3222471 | 73120.7 |
| hypothetical protein | ALP24_100655 | Not Available | Negative | 3222516 - 3222818 | 10587.6 |
| putative membrane protein | ALP24_04187 | Not Available | Negative | 3223239 - 3223664 | 16191.7 |
| type vi secretion system protein impa-1 | ALP24_05570 | Not Available | Negative | 3223842 - 3224942 | 40168.4 |
| putative type vi secretion system effector, hcp1 family | ALP24_100486 | Not Available | Negative | 3225029 - 3225571 | 19089.3 |
| type vi secretion system protein icmf | ALP24_05571 | Not Available | Negative | 3225706 - 3228198 | 94269.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









