Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_02696 | Not Available | Positive | 3135079 - 3135402 | 11099.5 |
| hypothetical protein | ALP24_101848 | Not Available | Positive | 3135365 - 3150049 | 534201.0 |
| luxr family transcriptional regulator | ALP24_02697 | Not Available | Negative | 3150167 - 3150766 | 22120.5 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALP24_02555 | Not Available | Negative | 3150936 - 3152078 | 42455.4 |
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALP24_100422 | Not Available | Positive | 3152136 - 3153455 | 47147.3 |
| putative had superfamily hydrolase | ALP24_02556 | Not Available | Positive | 3153519 - 3154208 | 25563.8 |
| asnc family transcriptional regulator | ALP24_02557 | Not Available | Positive | 3154256 - 3154744 | 18497.5 |
| methyl-accepting chemotaxis protein | ALP24_101322 | Not Available | Negative | 3154845 - 3155243 | 14202.6 |
| methyl-accepting chemotaxis protein | ALP24_02558 | Not Available | Negative | 3155219 - 3156805 | 54841.1 |
| regulatory protein lysr | ALP24_02559 | Not Available | Negative | 3157009 - 3157752 | 27695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









