Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide reductase | ALP24_04040 | Not Available | Positive | 3102007 - 3102540 | 19862.2 |
| cobalamin biosynthesis protein cobd | ALP24_04041 | Not Available | Positive | 3102537 - 3103445 | 32842.6 |
| l-threonine 3-o-phosphate decarboxylase | ALP24_04042 | Not Available | Positive | 3103438 - 3104442 | 37299.7 |
| cobyric acid synthase | ALP24_05500 | Not Available | Positive | 3104439 - 3104723 | 10035.2 |
| yd repeat protein | ALP24_03123 | Not Available | Positive | 3104724 - 3105172 | 17123.9 |
| hypothetical protein | ALP24_00285 | Not Available | Positive | 3105213 - 3106256 | 39081.0 |
| pua domain | ALP24_00286 | Not Available | Positive | 3106234 - 3106695 | 16772.9 |
| putative phage-related protein | ALP24_103229 | Not Available | Positive | 3106565 - 3107083 | 19075.9 |
| signal transduction histidine kinase regulating c4-dicarboxylate transport system | ALP24_00287 | Not Available | Positive | 3107106 - 3108953 | 69768.2 |
| hypothetical protein | ALP24_00288 | Not Available | Positive | 3109511 - 3111301 | 67323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









