Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell-wall associated rhs protein with yd-repeats and paar motif | ALP24_05545 | Not Available | Positive | 3070212 - 3070714 | 19424.4 |
| bifunctional protein fold | ALP24_03628 | Not Available | Negative | 3070781 - 3071503 | 25471.9 |
| frne-like thiol oxidoreductase | ALP24_04364 | Not Available | Positive | 3071647 - 3072121 | 17252.2 |
| abc transporter, transmembrane region:abc transporter | ALP24_04365 | Not Available | Positive | 3072114 - 3073940 | 66675.5 |
| sensor y box/ggdef domain/eal domain-containing protein | ALP24_102356 | Not Available | Positive | 3074037 - 3076526 | 91947.9 |
| hypothetical protein | ALP24_04366 | Not Available | Positive | 3076558 - 3077340 | 29860.7 |
| ggdef domain-containing protein | ALP24_04367 | Not Available | Negative | 3077368 - 3078405 | 38788.7 |
| oxoacyl- reductase | ALP24_04368 | Not Available | Negative | 3078502 - 3079242 | 26175.2 |
| phosphoglycolate phosphatase | ALP24_04369 | Not Available | Negative | 3079255 - 3079929 | 24836.9 |
| hypothetical protein | ALP24_04370 | Not Available | Negative | 3079930 - 3080631 | 26201.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









