Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus expression regulatory protein pils | ALP24_00831 | Not Available | Negative | 3026925 - 3028517 | 57974.4 |
| outer membrane protein assembly factor bamd | ALP24_00832 | Not Available | Negative | 3028860 - 3029882 | 38269.8 |
| sensor histidine kinase | ALP24_101420 | Not Available | Negative | 3030110 - 3031975 | 68810.5 |
| hypothetical protein | ALP24_100785 | Not Available | Positive | 3031979 - 3032182 | 7176.63 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ALP24_101487 | Not Available | Negative | 3032140 - 3032685 | 20451.1 |
| dtdp-glucose 4,6-dehydratase | ALP24_100021 | Not Available | Negative | 3032766 - 3033983 | 45432.9 |
| 4-aminobutyrate aminotransferase protein | ALP24_00833 | Not Available | Positive | 3034091 - 3037000 | 105284.0 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | ALP24_00834 | Not Available | Positive | 3037252 - 3038130 | 32748.6 |
| agmatine deiminase | ALP24_00835 | Not Available | Positive | 3038136 - 3039242 | 40796.1 |
| hypothetical protein | ALP24_00836 | Not Available | Positive | 3039463 - 3039669 | 7694.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









