Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALP24_00005 | Not Available | Positive | 3016923 - 3017870 | 34384.9 |
| type iv pilus bioproteinsis protein fimt | ALP24_00006 | Not Available | Negative | 3017877 - 3018377 | 17948.6 |
| putative pillin | ALP24_00007 | Not Available | Positive | 3018509 - 3018982 | 16406.0 |
| type iv pilus assembly protein pilv | ALP24_00008 | Not Available | Positive | 3018982 - 3019497 | 17774.0 |
| type iv pilus assembly protein pilx | ALP24_00009 | Not Available | Positive | 3020213 - 3020713 | 17482.5 |
| putative type iv pilus-associated protein | ALP24_00010 | Not Available | Positive | 3020700 - 3023438 | 97171.5 |
| putative type iv pilus-associated protein | ALP24_00011 | Not Available | Positive | 3023503 - 3023901 | 13680.1 |
| fad dependent oxidoreductase | ALP24_00012 | Not Available | Positive | 3024340 - 3025443 | 39436.4 |
| type iv pilus expression regulatory protein pilr | ALP24_00013 | Not Available | Negative | 3025570 - 3025854 | 10914.8 |
| helix-turn-helix, fis-type | ALP24_04591 | Not Available | Negative | 3026194 - 3027021 | 30236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









