Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chew-like domain protein | ALP24_01255 | Not Available | Positive | 2995846 - 2997333 | 53389.8 |
| hypothetical protein | ALP24_01256 | Not Available | Positive | 2997391 - 2997516 | 4622.37 |
| hypothetical protein | ALP24_01257 | Not Available | Negative | 2997604 - 2998002 | 14968.3 |
| metallo-beta-lactamase super protein | ALP24_01258 | Not Available | Negative | 2998125 - 2999000 | 31150.7 |
| lysr family transcriptional regulator | ALP24_01259 | Not Available | Positive | 2999055 - 2999999 | 34261.7 |
| methyl-accepting chemotaxis protein | ALP24_04703 | Not Available | Negative | 3000104 - 3000439 | 12163.3 |
| sarcosine oxidase, gamma subunit | ALP24_01260 | Not Available | Negative | 3002262 - 3002834 | 20615.4 |
| sarcosine oxidase, alpha subunit | ALP24_01261 | Not Available | Negative | 3002838 - 3005039 | 80069.2 |
| sarcosine oxidase, alpha subunit | ALP24_01262 | Not Available | Negative | 3005060 - 3005725 | 22923.8 |
| sarcosine oxidase, delta subunit | ALP24_01263 | Not Available | Negative | 3005722 - 3006027 | 11678.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









