Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 factor, interaction region | ALP24_02333 | Not Available | Positive | 2965105 - 2966055 | 34645.3 |
| metal ion abc-type transport system, periplasmic substrate-binding protein | ALP24_02334 | Not Available | Positive | 2966259 - 2967041 | 28230.2 |
| yd repeat-containing protein | ALP24_02554 | Not Available | Positive | 2967083 - 2967954 | 33313.1 |
| hypothetical protein | ALP24_102708 | Not Available | Positive | 2967927 - 2968397 | 17553.9 |
| pas protein | ALP24_01729 | Not Available | Positive | 2970829 - 2972922 | 76944.6 |
| two-component system response regulator | ALP24_01730 | Not Available | Positive | 2972954 - 2974321 | 49004.3 |
| luxr family dna-binding response regulator | ALP24_100321 | Not Available | Negative | 2974294 - 2974956 | 23994.3 |
| hypothetical protein | ALP24_01731 | Not Available | Positive | 2975246 - 2975542 | 10479.6 |
| hypothetical protein | ALP24_01732 | Not Available | Negative | 2975714 - 2976595 | 32722.9 |
| yaeq | ALP24_01733 | Not Available | Positive | 2976882 - 2977424 | 20734.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









