Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | ALP24_00189 | Not Available | Positive | 2951888 - 2952910 | 35595.0 |
| hypothetical protein | ALP24_101952 | Not Available | Positive | 2954472 - 2954846 | 13828.8 |
| hypothetical protein | ALP24_00190 | Not Available | Positive | 2954843 - 2955088 | 8610.96 |
| ispsy20, transposase ista | ALP24_04736 | Not Available | Negative | 2956067 - 2957575 | 57107.0 |
| aminopeptidase p | ALP24_02329 | Not Available | Positive | 2957684 - 2958670 | 36335.6 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | ALP24_100069 | Not Available | Positive | 2958667 - 2959854 | 43144.4 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALP24_100106 | Not Available | Positive | 2959855 - 2961135 | 47029.5 |
| helix-turn-helix, arac type | ALP24_04990 | Not Available | Negative | 2961306 - 2962304 | 37256.0 |
| mfs transporter, phthalate permease protein | ALP24_02331 | Not Available | Positive | 2962910 - 2964226 | 47391.4 |
| serine hydrolase, alpha/beta hydrolase family | ALP24_02332 | Not Available | Positive | 2964440 - 2965021 | 21966.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









