Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_102873 | Not Available | Negative | 2922046 - 2922177 | 4583.47 |
| peptidyl-prolyl cis-trans isomerase d | ALP24_04229 | Not Available | Positive | 2922259 - 2924142 | 69064.7 |
| enoyl | ALP24_04230 | Not Available | Negative | 2924217 - 2925011 | 27937.4 |
| abc transporter atp-binding protein | ALP24_100408 | Not Available | Negative | 2925030 - 2926568 | 53442.1 |
| abc-type nickel/dipeptide/oligopeptide-type transport system | ALP24_04231 | Not Available | Negative | 2926570 - 2927589 | 37945.7 |
| abc transporter periplasmic substrate-binding protein | ALP24_04232 | Not Available | Negative | 2927591 - 2932462 | 179495.0 |
| putative membrane-bound lytic murein transglycosylase d | ALP24_04233 | Not Available | Negative | 2932462 - 2934084 | 59972.9 |
| type iii effector protein avre1 | ALP24_04234 | Not Available | Positive | 2934303 - 2936177 | 67497.7 |
| hypothetical protein | ALP24_05691 | Not Available | Negative | 2936009 - 2937133 | 40356.2 |
| hypothetical protein | ALP24_00179 | Not Available | Positive | 2937187 - 2937339 | 5915.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









