Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_01004 | Not Available | Negative | 2900776 - 2901168 | 14869.5 |
| site-specific recombinase, phage integrase | ALP24_04632 | Not Available | Negative | 2901500 - 2902567 | 40598.8 |
| hypothetical protein | ALP24_01006 | Not Available | Positive | 2902689 - 2903162 | 17025.4 |
| putative quinone oxidoreductase, yhdh/yhfp family | ALP24_04633 | Not Available | Negative | 2903168 - 2903569 | 13379.3 |
| polyribonucleotide nucleotidyltransferase | ALP24_05089 | Not Available | Negative | 2903852 - 2905957 | 75034.5 |
| hypothetical protein | ALP24_101019 | Not Available | Positive | 2905883 - 2906050 | 6119.44 |
| 30s ribosomal protein s15 | ALP24_05090 | Not Available | Negative | 2906133 - 2906324 | 7284.09 |
| trna pseudouridine synthase b | ALP24_02698 | Not Available | Negative | 2906562 - 2907479 | 33546.2 |
| ribosome-binding factor a | ALP24_02699 | Not Available | Negative | 2907483 - 2907899 | 15381.4 |
| translation initiation factor if-2 | ALP24_05091 | Not Available | Negative | 2908059 - 2910584 | 90597.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









