Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | ALP24_02035 | Not Available | Positive | 2865066 - 2866235 | 40496.0 |
| putative lipoprotein | ALP24_100144 | Not Available | Positive | 2866236 - 2866493 | 9403.3 |
| hypothetical protein | ALP24_02036 | Not Available | Positive | 2866578 - 2866775 | 6790.05 |
| putative membrane-bound lysozyme-inhibitor of c-type lysozyme | ALP24_02037 | Not Available | Positive | 2866828 - 2867154 | 11794.9 |
| fructose-1,6-bisphosphate aldolase | ALP24_100009 | Not Available | Positive | 2867268 - 2868332 | 38575.1 |
| outer membrane efflux protein | ALP24_04207 | Not Available | Negative | 2868421 - 2869752 | 48590.4 |
| abc transporter permease | ALP24_04087 | Not Available | Negative | 2871421 - 2872215 | 28657.9 |
| abc transporter, substrate-binding protein, aliphatic sulfonate | ALP24_04088 | Not Available | Negative | 2872253 - 2873260 | 36308.4 |
| hypothetical protein | ALP24_04138 | Not Available | Positive | 2874417 - 2876924 | 90633.0 |
| putative signal peptide protein | ALP24_00987 | Not Available | Negative | 2878363 - 2879310 | 34415.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









